EnhancerDB
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  3. rs545199586[chr19:6107024]
Enhancers that have rs545199586[chr19:6107024]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6084063 6113078 enh17886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs545199586[chr19:6107024]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6107010 6107025 SCRT1 JASPAR yes 112258226
chr19 6107014 6107024 ID4 JASPAR yes 112258229
chr19 6107014 6107024 TCF3 JASPAR yes 112258230
chr19 6107014 6107024 TCF4 JASPAR yes 112258231
chr19 6107020 6107033 TFAP2A JASPAR yes 112258232
chr19 6107020 6107033 TFAP2C JASPAR yes 112258233
Genes associated with rs545199586[chr19:6107024], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More