EnhancerDB
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  3. rs545201809[chr16:85579378]
Enhancers that have rs545201809[chr16:85579378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs545201809[chr16:85579378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85576695 85579765 ZNF143 GTRD no Epithelial (MCF-7) 21728577
chr16 85578155 85579378 ZNF274 GTRD no Bone Marrow (K562) 21728592
chr16 85578547 85579509 ZNF143 GTRD no Epithelial (MCF-7) 21728594
chr16 85578590 85579833 ZNF143 GTRD no Epithelial (MCF-7) 21728595
chr16 85578607 85579925 ZNF143 GTRD no Epithelial (MCF-7) 21728597
chr16 85578624 85579764 TCF7L2 GTRD no Colon (HCT116) 21728598
chr16 85578638 85579420 ZNF143 GTRD no Epithelial (MCF-7) 21728599
chr16 85578660 85580416 ZNF274 GTRD no Bone Marrow (K562) 21728600
chr16 85578686 85580273 ZNF274 GTRD no Bone Marrow (K562) 21728601
chr16 85578706 85579391 ZNF143 GTRD no Epithelial (MCF-7) 21728602
chr16 85578766 85579418 ZNF143 GTRD no Epithelial (MCF-7) 21728604
chr16 85579037 85579684 TCF7L2 GTRD no Colon (HCT116) 21728606
chr16 85579064 85579428 TCF7L2 GTRD no Colon (HCT116) 21728607
chr16 85579151 85579617 SOX2 GTRD no Neural Stem Cells (H9) 21728608
chr16 85579210 85579545 SOX2 GTRD no Neural Stem Cells (H9) 21728609
chr16 85579215 85579632 SOX2 GTRD no Neural Stem Cells (H9) 21728610
chr16 85579253 85579656 SOX2 GTRD no Neural Stem Cells (H9) 21728611
chr16 85579303 85579670 SOX2 GTRD no Neural Stem Cells (H9) 21728612
chr16 85579359 85580378 ZNF274 GTRD no Bone Marrow (K562) 21728613
chr16 85579360 85579380 RREB1 JASPAR yes 12074642
chr16 85579364 85579379 FOXP1 JASPAR yes 12074643
chr16 85579365 85579385 RREB1 JASPAR yes 12074645
chr16 85579367 85579382 RUNX2 JASPAR yes 12074646
chr16 85579369 85579389 RREB1 JASPAR yes 12074647
chr16 85579370 85579390 RREB1 JASPAR yes 12074648
chr16 85579373 85579393 RREB1 JASPAR yes 12074649
chr16 85579374 85579394 RREB1 JASPAR yes 12074650
chr16 85579377 85579389 FOXI1 JASPAR yes 12074651
chr16 85579377 85579397 RREB1 JASPAR yes 12074652
chr16 85579378 85579398 RREB1 JASPAR yes 12074653
Genes associated with rs545201809[chr16:85579378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More