EnhancerDB
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  3. rs545263182[chr12:65012708]
Enhancers that have rs545263182[chr12:65012708]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65008245 65038815 enh2404
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs545263182[chr12:65012708]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65012699 65012711 MEF2A JASPAR yes 121416297
chr12 65012699 65012711 MEF2D JASPAR yes 121416298
chr12 65012701 65012712 CDX2 JASPAR yes 121416299
chr12 65012701 65012716 FOXP1 JASPAR yes 121416300
chr12 65012702 65012713 HOXA10 JASPAR yes 121416301
chr12 65012702 65012723 IRF1 JASPAR yes 121416302
chr12 65012703 65012712 CDX1 JASPAR yes 121416303
chr12 65012703 65012713 HOXA13 JASPAR yes 121416304
chr12 65012703 65012713 HOXB13 JASPAR yes 121416305
chr12 65012703 65012713 HOXD13 JASPAR yes 121416306
chr12 65012703 65012718 FOXP1 JASPAR yes 121416307
chr12 65012705 65012720 FOXP1 JASPAR yes 121416308
chr12 65012706 65012727 IRF1 JASPAR yes 121416309
chr12 65012707 65012713 TBP TRANSFAC yes 121416310
chr12 65012707 65012722 FOXP1 JASPAR yes 121416311
Genes associated with rs545263182[chr12:65012708], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More