EnhancerDB
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  3. rs545271821[chr1:1608906]
Enhancers that have rs545271821[chr1:1608906]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1607365 1622353 enh2
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs545271821[chr1:1608906]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1608899 1608917 IRF2 JASPAR yes 26197707
chr1 1608900 1608921 IRF1 JASPAR yes 26197708
chr1 1608902 1608917 PRDM1 JASPAR yes 26197709
chr1 1608902 1608917 STAT2 JASPAR yes 26197710
chr1 1608903 1608917 SPIC JASPAR yes 26197711
chr1 1608903 1608917 STAT1 JASPAR yes 26197712
chr1 1608904 1608918 IRF7 JASPAR yes 26197713
chr1 1608904 1608918 IRF8 JASPAR yes 26197714
chr1 1608904 1608919 IRF9 JASPAR yes 26197715
chr1 1608905 1608920 FOXP1 JASPAR yes 26197716
chr1 1608905 1608926 IRF1 JASPAR yes 26197717
chr1 1608906 1608927 IRF1 JASPAR yes 26197718
Genes associated with rs545271821[chr1:1608906], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More