EnhancerDB
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Enhancers that have rs545288271[chr19:13958388]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 13957204 13959386 vista28720
VISTA
Transcript factors that have rs545288271[chr19:13958388]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13957196 13959039 POLR2A UCSC Txn Factor no Conserved 108390205
chr19 13957253 13958944 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852271
chr19 13957253 13958944 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390211
chr19 13957272 13959000 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852277
chr19 13957272 13959000 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390218
chr19 13957670 13958708 ZNF274 GTRD no Bone Marrow (K562) 21852348
chr19 13957670 13958708 ZNF274 GTRD no Bone Marrow (K562) 108390301
chr19 13957697 13959023 ZNF274 GTRD no Bone Marrow (K562) 21852353
chr19 13957697 13959023 ZNF274 GTRD no Bone Marrow (K562) 108390307
chr19 13957718 13958390 ZNF274 GTRD no Bone Marrow (K562) 21852355
chr19 13957718 13958390 ZNF274 GTRD no Bone Marrow (K562) 108390312
chr19 13957793 13958455 ZNF274 GTRD no Bone Marrow (K562) 21852368
chr19 13957793 13958455 ZNF274 GTRD no Bone Marrow (K562) 108390332
chr19 13957833 13958890 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390349
chr19 13957846 13958426 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390351
chr19 13957864 13958516 ZNF274 GTRD no Bone Marrow (K562) 21852384
chr19 13957864 13958516 ZNF274 GTRD no Bone Marrow (K562) 108390353
chr19 13957881 13958537 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21852386
chr19 13957881 13958537 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108390355
chr19 13957887 13958532 ZNF143 GTRD no Epithelial (MCF-7) 21852388
chr19 13957887 13958532 ZNF143 GTRD no Epithelial (MCF-7) 108390357
chr19 13957898 13958668 ZNF274 GTRD no Bone Marrow (K562) 21852390
chr19 13957898 13958668 ZNF274 GTRD no Bone Marrow (K562) 108390360
chr19 13957902 13958821 ZNF274 GTRD no Bone Marrow (K562) 21852391
chr19 13957902 13958821 ZNF274 GTRD no Bone Marrow (K562) 108390361
chr19 13957919 13958937 ZNF274 GTRD no Bone Marrow (K562) 21852393
chr19 13957919 13958937 ZNF274 GTRD no Bone Marrow (K562) 108390363
chr19 13957923 13958657 ZNF274 GTRD no Bone Marrow (K562) 21852397
chr19 13957923 13958657 ZNF274 GTRD no Bone Marrow (K562) 108390367
chr19 13957924 13958543 ZNF274 GTRD no Bone Marrow (K562) 21852398
chr19 13957924 13958543 ZNF274 GTRD no Bone Marrow (K562) 108390368
chr19 13957964 13958473 TCF7L2 GTRD no Colon (HCT116) 21852406
chr19 13957964 13958473 TCF7L2 GTRD no Colon (HCT116) 108390377
chr19 13957971 13958427 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852407
chr19 13957971 13958427 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390379
chr19 13957972 13958428 ZNF274 GTRD no Bone Marrow (K562) 21852408
chr19 13957972 13958428 ZNF274 GTRD no Bone Marrow (K562) 108390380
chr19 13957986 13958450 ZNF274 GTRD no Bone Marrow (K562) 21852412
chr19 13957986 13958450 ZNF274 GTRD no Bone Marrow (K562) 108390385
chr19 13957992 13958439 TCF7L2 GTRD no Colon (HCT116) 21852414
chr19 13957992 13958439 TCF7L2 GTRD no Colon (HCT116) 108390387
chr19 13958015 13958395 ZNF274 GTRD no Bone Marrow (K562) 21852420
chr19 13958015 13958395 ZNF274 GTRD no Bone Marrow (K562) 108390394
chr19 13958035 13958435 ZNF143 GTRD no Epithelial (MCF-7) 21852422
chr19 13958035 13958435 ZNF143 GTRD no Epithelial (MCF-7) 108390396
chr19 13958053 13958429 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852424
chr19 13958053 13958429 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390398
chr19 13958085 13958398 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390403
chr19 13958086 13958390 ZNF274 GTRD no Bone Marrow (K562) 21852429
chr19 13958086 13958390 ZNF274 GTRD no Bone Marrow (K562) 108390404
chr19 13958108 13958484 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852430
chr19 13958108 13958484 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390405
chr19 13958131 13958402 ZNF274 GTRD no Bone Marrow (K562) 21852432
chr19 13958131 13958402 ZNF274 GTRD no Bone Marrow (K562) 108390407
chr19 13958158 13958662 ZNF274 GTRD no Bone Marrow (K562) 21852435
chr19 13958158 13958662 ZNF274 GTRD no Bone Marrow (K562) 108390411
chr19 13958159 13958849 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852436
chr19 13958159 13958849 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390412
chr19 13958172 13958402 ZNF274 GTRD no Bone Marrow (K562) 21852439
chr19 13958172 13958402 ZNF274 GTRD no Bone Marrow (K562) 108390415
chr19 13958176 13958702 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852440
chr19 13958176 13958702 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390416
chr19 13958234 13958918 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852441
chr19 13958234 13958918 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390417
chr19 13958265 13958841 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852442
chr19 13958265 13958841 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390418
chr19 13958299 13958823 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21852443
chr19 13958299 13958823 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108390419
chr19 13958304 13958820 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852444
chr19 13958304 13958820 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390420
chr19 13958304 13958854 TCF7L2 UCSC Txn Factor no Conserved 108390421
chr19 13958310 13958910 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108390422
chr19 13958316 13958692 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852445
chr19 13958316 13958692 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390423
chr19 13958317 13958807 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852446
chr19 13958317 13958807 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390424
chr19 13958346 13959070 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852447
chr19 13958346 13959070 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390425
chr19 13958363 13958663 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852448
chr19 13958363 13958663 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390426
chr19 13958367 13958787 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852449
chr19 13958367 13958787 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108390427
chr19 13958374 13958392 NFYA JASPAR yes 70810638
chr19 13958374 13958392 NFYA JASPAR yes 112537869
chr19 13958379 13958909 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852450
chr19 13958379 13958909 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390428
chr19 13958380 13958398 E2F3 JASPAR yes 70810639
chr19 13958380 13958398 E2F3 JASPAR yes 112537870
chr19 13958380 13958816 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108390429
chr19 13958383 13958395 E2F1 JASPAR yes 70810641
chr19 13958383 13958395 E2F1 JASPAR yes 112537872
Genes associated with rs545288271[chr19:13958388], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More