EnhancerDB
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  3. rs545296388[chr6:86118286]
Enhancers that have rs545296388[chr6:86118286]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 86109285 86118699 enh23394
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Stomach Skin (Keratinocyte) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs545296388[chr6:86118286]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 86118269 86118290 IRF1 JASPAR yes 103252580
chr6 86118270 86118291 IRF1 JASPAR yes 103252582
chr6 86118271 86118286 FOXP1 JASPAR yes 103252583
chr6 86118271 86118292 IRF1 JASPAR yes 103252584
chr6 86118272 86118287 FOXP1 JASPAR yes 103252585
chr6 86118273 86118288 FOXP1 JASPAR yes 103252586
chr6 86118274 86118289 FOXP1 JASPAR yes 103252587
chr6 86118275 86118290 FOXP1 JASPAR yes 103252588
chr6 86118276 86118291 FOXP1 JASPAR yes 103252589
chr6 86118277 86118292 FOXP1 JASPAR yes 103252590
chr6 86118277 86118298 IRF1 JASPAR yes 103252591
chr6 86118278 86118291 POU2F2 JASPAR yes 103252592
chr6 86118281 86118293 IRF1 JASPAR yes 103252593
chr6 86118281 86118295 IRF7 JASPAR yes 103252594
chr6 86118281 86118302 IRF1 JASPAR yes 103252595
chr6 86118286 86118290 YY1 TRANSFAC yes 103252596
chr6 86118286 86118306 RREB1 JASPAR yes 103252597
Genes associated with rs545296388[chr6:86118286], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More