EnhancerDB
  1. Home
  2. SNP
  3. rs545309614[chr1:201428232]
Enhancers that have rs545309614[chr1:201428232]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201414985 201433510 enh875
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs545309614[chr1:201428232]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201427850 201428889 ZNF143 GTRD no Epithelial (MCF-7) 21364079
chr1 201427927 201428338 ZNF274 GTRD no Cervix (HeLa-S3) 21364080
chr1 201427963 201428477 TCF7L2 GTRD no Colon (HCT116) 21364081
chr1 201428223 201428233 HMBOX1 JASPAR yes 34496012
chr1 201428225 201428240 MEF2C JASPAR yes 34496013
chr1 201428226 201428241 MEF2A JASPAR yes 34496014
chr1 201428227 201428239 MEF2A JASPAR yes 34496015
chr1 201428227 201428239 MEF2B JASPAR yes 34496016
chr1 201428227 201428239 MEF2D JASPAR yes 34496017
chr1 201428228 201428238 MEF2A JASPAR yes 34496018
chr1 201428229 201428243 FOXF2 JASPAR yes 34496019
chr1 201428229 201428243 ONECUT2 JASPAR yes 34496020
chr1 201428229 201428243 ONECUT3 JASPAR yes 34496021
chr1 201428229 201428244 FOXP1 JASPAR yes 34496022
chr1 201428230 201428245 FOXA1 JASPAR yes 34496023
chr1 201428231 201428242 FOXB1 JASPAR yes 34496024
chr1 201428231 201428242 FOXC1 JASPAR yes 34496025
chr1 201428231 201428243 FOXC2 JASPAR yes 34496026
chr1 201428232 201428244 FOXI1 JASPAR yes 34496027
Genes associated with rs545309614[chr1:201428232], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More