EnhancerDB
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  3. rs545343178[chr1:7620428]
Enhancers that have rs545343178[chr1:7620428]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 7605943 7624475 enh41
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs545343178[chr1:7620428]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 7620414 7620429 TFAP2A JASPAR yes 26477122
chr1 7620414 7620429 TFAP2C JASPAR yes 26477123
chr1 7620416 7620430 PLAG1 JASPAR yes 26477124
chr1 7620417 7620428 EBF1 JASPAR yes 26477125
chr1 7620417 7620428 TFAP2A JASPAR yes 26477126
chr1 7620417 7620428 TFAP2B JASPAR yes 26477127
chr1 7620417 7620429 TFAP2A JASPAR yes 26477128
chr1 7620417 7620429 TFAP2B JASPAR yes 26477129
chr1 7620417 7620429 TFAP2C JASPAR yes 26477130
chr1 7620423 7620438 NR2C2 JASPAR yes 26477132
chr1 7620425 7620438 SMAD2 JASPAR yes 26477133
Genes associated with rs545343178[chr1:7620428], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More