EnhancerDB
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  3. rs545383013[chr1:1621020]
Enhancers that have rs545383013[chr1:1621020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1607365 1622353 enh2
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs545383013[chr1:1621020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1621002 1621020 RARA JASPAR yes 26199540
chr1 1621003 1621020 ESR1 JASPAR yes 26199541
chr1 1621003 1621021 ESR2 JASPAR yes 26199542
chr1 1621009 1621022 NR2F1 JASPAR yes 26199544
chr1 1621013 1621023 RORA JASPAR yes 26199545
chr1 1621013 1621031 SRF JASPAR yes 26199546
chr1 1621019 1621031 INSM1 JASPAR yes 26199547
Genes associated with rs545383013[chr1:1621020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More