EnhancerDB
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  3. rs545504282[chr1:3245527]
Enhancers that have rs545504282[chr1:3245527]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 3244561 3248729 vista2
VISTA
Transcript factors that have rs545504282[chr1:3245527]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3245525 3245536 NFKB1 JASPAR yes 26280597
chr1 3245525 3245536 NFKB1 JASPAR yes 71117558
chr1 3245525 3245538 NFKB1 JASPAR yes 26280598
chr1 3245525 3245538 NFKB2 JASPAR yes 26280599
chr1 3245525 3245538 NFKB1 JASPAR yes 71117559
chr1 3245525 3245538 NFKB2 JASPAR yes 71117560
chr1 3245526 3245536 NFKB1 JASPAR yes 26280600
chr1 3245526 3245536 RELA JASPAR yes 26280601
chr1 3245526 3245536 NFKB1 JASPAR yes 71117561
chr1 3245526 3245536 RELA JASPAR yes 71117562
chr1 3245526 3245537 NFKB1 JASPAR yes 26280602
chr1 3245526 3245537 NFKB1 JASPAR yes 71117563
chr1 3245527 3245537 NFKB1 JASPAR yes 26280603
chr1 3245527 3245537 REL JASPAR yes 26280604
chr1 3245527 3245537 NFKB1 JASPAR yes 71117564
chr1 3245527 3245537 REL JASPAR yes 71117565
Genes associated with rs545504282[chr1:3245527], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More