EnhancerDB
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  3. rs545579637[chr12:52545842]
Enhancers that have rs545579637[chr12:52545842]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
chr12 52545730 52546132 vista13448
VISTA
Transcript factors that have rs545579637[chr12:52545842]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52545315 52545965 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546478
chr12 52545315 52545965 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033281
chr12 52545538 52545858 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546479
chr12 52545538 52545858 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033282
chr12 52545563 52546213 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546480
chr12 52545563 52546213 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033283
chr12 52545601 52546261 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546481
chr12 52545601 52546261 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033284
chr12 52545607 52546147 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033285
chr12 52545628 52546004 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546482
chr12 52545628 52546004 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033286
chr12 52545645 52545995 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033287
chr12 52545652 52546332 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546483
chr12 52545652 52546332 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033288
chr12 52545664 52546120 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546484
chr12 52545664 52546120 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033289
chr12 52545669 52546209 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033290
chr12 52545673 52546177 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546485
chr12 52545673 52546177 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033291
chr12 52545684 52545960 ZNF274 GTRD no Bone Marrow (K562) 108033292
chr12 52545685 52545958 ESR1 UCSC Txn Factor no Conserved 108033293
chr12 52545722 52546106 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546486
chr12 52545722 52546106 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033294
chr12 52545722 52546427 POLR2A UCSC Txn Factor no Conserved 108033295
chr12 52545742 52546132 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108033296
chr12 52545743 52546227 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033297
chr12 52545768 52546344 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033298
chr12 52545781 52546217 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033299
chr12 52545812 52546595 ZBTB33 GTRD no Lung (A549) 108033300
chr12 52545815 52546185 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546487
chr12 52545815 52546185 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033301
chr12 52545821 52546472 TCF7L2 GTRD no Colon (HCT116) 21546488
chr12 52545821 52546472 TCF7L2 GTRD no Colon (HCT116) 108033302
chr12 52545831 52546209 CTCF UCSC Txn Factor no Conserved 108033303
chr12 52545834 52546230 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546489
chr12 52545834 52546230 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033304
chr12 52545835 52546299 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546490
chr12 52545835 52546299 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033305
Genes associated with rs545579637[chr12:52545842], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More