EnhancerDB
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  3. rs545581612[chr19:6063376]
Enhancers that have rs545581612[chr19:6063376]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6055365 6071655 enh17885
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs545581612[chr19:6063376]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6062199 6064174 POLR2A UCSC Txn Factor no Conserved 108376706
chr19 6062199 6064174 POLR2A UCSC Txn Factor no Conserved 108376707
chr19 6062859 6063912 TCF7L2 GTRD no Colon (HCT116) 108376716
chr19 6063121 6063775 TCF7L2 GTRD no Colon (HCT116) 108376717
chr19 6063270 6064030 TCF7L2 GTRD no Colon (HCT116) 108376718
chr19 6063375 6063379 H4TF2 TRANSFAC yes 112253711
Genes associated with rs545581612[chr19:6063376], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More