EnhancerDB
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  3. rs545779942[chr1:2172186]
Enhancers that have rs545779942[chr1:2172186]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 2172142 2172385 vista64
VISTA
Transcript factors that have rs545779942[chr1:2172186]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2171575 2172429 ZNF143 GTRD no Epithelial (MCF-7) 107801814
chr1 2172185 2172199 GLIS3 JASPAR yes 26225629
chr1 2172185 2172199 GLIS3 JASPAR yes 118216133
Genes associated with rs545779942[chr1:2172186], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More