EnhancerDB
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  3. rs545907049[chr1:178904640]
Enhancers that have rs545907049[chr1:178904640]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178892945 178926835 enh769
Epithelial (MCF-7) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs545907049[chr1:178904640]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178903802 178904770 ZNF143 GTRD no Epithelial (MCF-7) 21352974
chr1 178903802 178904770 ZNF143 GTRD no Epithelial (MCF-7) 107847447
chr1 178903828 178904704 ZNF143 GTRD no Epithelial (MCF-7) 21352975
chr1 178903828 178904704 ZNF143 GTRD no Epithelial (MCF-7) 107847448
chr1 178903983 178904739 ZNF143 GTRD no Epithelial (MCF-7) 21352979
chr1 178904015 178904649 ZNF143 GTRD no Epithelial (MCF-7) 21352981
chr1 178904632 178904644 PKNOX2 JASPAR yes 33454561
chr1 178904638 178904642 NFE TRANSFAC yes 33454562
Genes associated with rs545907049[chr1:178904640], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More