EnhancerDB
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  3. rs545990088[chr1:8973071]
Enhancers that have rs545990088[chr1:8973071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8954605 8983075 enh11478
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs545990088[chr1:8973071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8973058 8973079 IRF1 JASPAR yes 26608126
chr1 8973059 8973080 ZNF263 JASPAR yes 26608127
chr1 8973062 8973083 ZNF263 JASPAR yes 26608128
chr1 8973063 8973084 ZNF263 JASPAR yes 26608129
chr1 8973064 8973079 FOXP1 JASPAR yes 26608130
chr1 8973065 8973086 ZNF263 JASPAR yes 26608131
chr1 8973066 8973087 ZNF263 JASPAR yes 26608132
chr1 8973068 8973089 IRF1 JASPAR yes 26608133
chr1 8973071 8973092 IRF1 JASPAR yes 26608134
Genes associated with rs545990088[chr1:8973071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More