EnhancerDB
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  3. rs546042582[chr1:21630968]
Enhancers that have rs546042582[chr1:21630968]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546042582[chr1:21630968]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21630962 21630977 TFAP2C JASPAR yes 27293397
chr1 21630963 21630977 PLAG1 JASPAR yes 27293398
chr1 21630964 21630979 TFAP2A JASPAR yes 27293399
chr1 21630964 21630981 RARA JASPAR yes 27293400
chr1 21630966 21630975 TFAP2A JASPAR yes 27293401
Genes associated with rs546042582[chr1:21630968], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More