EnhancerDB
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  3. rs546053193[chr1:224387958]
Enhancers that have rs546053193[chr1:224387958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs546053193[chr1:224387958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224387951 224387961 SP1 JASPAR yes 35692950
chr1 224387957 224387968 FOSL2 JASPAR yes 35692951
chr1 224387958 224387969 NFE2 JASPAR yes 35692952
Genes associated with rs546053193[chr1:224387958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More