EnhancerDB
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  3. rs546181789[chr1:223916453]
Enhancers that have rs546181789[chr1:223916453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546181789[chr1:223916453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223916442 223916453 NFKB1 JASPAR yes 35673494
chr1 223916443 223916453 NFKB1 JASPAR yes 35673495
chr1 223916443 223916453 RELA JASPAR yes 35673496
chr1 223916443 223916454 NFKB1 JASPAR yes 35673497
chr1 223916447 223916461 EBF1 JASPAR yes 35673498
Genes associated with rs546181789[chr1:223916453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More