EnhancerDB
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  3. rs546188490[chr1:212092204]
Enhancers that have rs546188490[chr1:212092204]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs546188490[chr1:212092204]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212091596 212092217 ZNF274 GTRD no Cervix (HeLa-S3) 21377575
chr1 212092186 212092207 IRF1 JASPAR yes 35091314
chr1 212092186 212092207 ZNF263 JASPAR yes 35091315
chr1 212092190 212092211 IRF1 JASPAR yes 35091316
chr1 212092194 212092215 IRF1 JASPAR yes 35091317
chr1 212092198 212092219 IRF1 JASPAR yes 35091318
chr1 212092198 212092219 ZNF263 JASPAR yes 35091319
chr1 212092201 212092222 ZNF263 JASPAR yes 35091320
chr1 212092202 212092223 IRF1 JASPAR yes 35091321
chr1 212092202 212092223 ZNF263 JASPAR yes 35091322
Genes associated with rs546188490[chr1:212092204], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More