EnhancerDB
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  3. rs546220410[chr17:4759080]
Enhancers that have rs546220410[chr17:4759080]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 4739171 4760073 enh16944
Bone Marrow (K562) Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546220410[chr17:4759080]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 4759063 4759084 IRF1 JASPAR yes 52859319
chr17 4759064 4759085 IRF1 JASPAR yes 52859321
chr17 4759065 4759080 FOXP1 JASPAR yes 52859322
chr17 4759065 4759086 IRF1 JASPAR yes 52859323
chr17 4759066 4759081 FOXP1 JASPAR yes 52859324
chr17 4759066 4759087 IRF1 JASPAR yes 52859325
chr17 4759067 4759082 FOXP1 JASPAR yes 52859326
chr17 4759067 4759088 IRF1 JASPAR yes 52859327
chr17 4759068 4759083 FOXP1 JASPAR yes 52859328
chr17 4759070 4759085 FOXP1 JASPAR yes 52859329
chr17 4759071 4759092 IRF1 JASPAR yes 52859330
chr17 4759072 4759087 FOXP1 JASPAR yes 52859331
chr17 4759075 4759089 SPIC JASPAR yes 52859332
chr17 4759075 4759089 STAT1 JASPAR yes 52859333
chr17 4759075 4759090 PRDM1 JASPAR yes 52859334
chr17 4759075 4759090 STAT2 JASPAR yes 52859335
chr17 4759075 4759096 IRF1 JASPAR yes 52859336
Genes associated with rs546220410[chr17:4759080], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More