EnhancerDB
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  3. rs546228049[chr16:17462001]
Enhancers that have rs546228049[chr16:17462001]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 17451685 17463195 enh3922
Blood (T-cell) Bone (Osteoblast) Thyroid Breast Uterus Blood (Karpas-422) Pancreas Neural Stem Cells (H9) Thymus Stomach
chr16 17461925 17462041 vista22039
VISTA
Transcript factors that have rs546228049[chr16:17462001]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 17459409 17463236 ZNF274 GTRD no Blood (GM12878) 108185788
chr16 17459409 17463236 ZNF274 GTRD no Blood (GM12878) 108185789
chr16 17459409 17463236 ZNF274 GTRD no Blood (GM12878) 108185790
chr16 17459450 17463098 ZNF274 GTRD no Blood (GM12878) 108185791
chr16 17459450 17463098 ZNF274 GTRD no Blood (GM12878) 108185792
chr16 17459450 17463098 ZNF274 GTRD no Blood (GM12878) 108185793
chr16 17459608 17464125 ZNF274 GTRD no Blood (GM12878) 108185798
chr16 17459608 17464125 ZNF274 GTRD no Blood (GM12878) 108185799
chr16 17459608 17464125 ZNF274 GTRD no Blood (GM12878) 108185800
chr16 17459608 17464125 ZNF274 GTRD no Blood (GM12878) 108185801
chr16 17461563 17463121 ZNF274 GTRD no Blood (GM12878) 108185808
chr16 17461563 17463121 ZNF274 GTRD no Blood (GM12878) 108185809
chr16 17461699 17464038 ZNF274 GTRD no Blood (GM12878) 108185810
chr16 17461699 17464038 ZNF274 GTRD no Blood (GM12878) 108185811
chr16 17461699 17464038 ZNF274 GTRD no Blood (GM12878) 108185812
chr16 17461725 17464184 ZNF274 GTRD no Blood (GM12878) 108185813
chr16 17461725 17464184 ZNF274 GTRD no Blood (GM12878) 108185814
chr16 17461725 17464184 ZNF274 GTRD no Blood (GM12878) 108185815
chr16 17461739 17462861 ZNF274 GTRD no Blood (GM12878) 108185816
chr16 17461765 17462089 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108185817
chr16 17461775 17462815 ZNF274 GTRD no Blood (GM12878) 108185818
chr16 17461782 17462072 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108185819
chr16 17461787 17462157 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108185820
chr16 17461788 17462418 ZNF143 GTRD no Epithelial (MCF-7) 108185821
chr16 17461813 17462771 ZNF274 GTRD no Blood (GM12878) 108185822
chr16 17461813 17462821 ZNF274 GTRD no Blood (GM12878) 108185823
chr16 17461815 17462539 ZNF274 GTRD no Blood (GM12878) 108185824
chr16 17461821 17462539 ZNF274 GTRD no Blood (GM12878) 108185825
chr16 17461839 17462083 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108185826
chr16 17461842 17462086 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108185827
chr16 17461850 17462624 ZNF143 GTRD no Epithelial (MCF-7) 108185828
chr16 17461851 17462121 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108185829
chr16 17461870 17462830 ZNF274 GTRD no Blood (GM12878) 108185830
chr16 17461873 17462514 ZNF274 GTRD no Blood (GM12878) 108185831
chr16 17461874 17462848 ZNF274 GTRD no Blood (GM12878) 108185832
chr16 17461889 17462608 ZNF274 GTRD no Blood (GM12878) 108185833
chr16 17461898 17462625 ZNF274 GTRD no Blood (GM12878) 108185834
chr16 17461898 17462857 ZNF274 GTRD no Blood (GM12878) 108185835
chr16 17461908 17462481 ZNF274 GTRD no Liver (HepG2) 108185836
chr16 17461910 17462925 ZNF274 GTRD no Blood (GM12878) 108185837
chr16 17461910 17462925 ZNF274 GTRD no Blood (GM12878) 108185838
chr16 17461911 17462478 ZNF143 GTRD no Epithelial (MCF-7) 108185839
chr16 17461923 17462345 ZNF274 GTRD no Blood (GM12878) 108185840
chr16 17461937 17462666 ZNF274 GTRD no Blood (GM12878) 108185841
chr16 17461938 17462638 ZNF274 GTRD no Blood (GM12878) 108185842
chr16 17461939 17462562 ZNF143 GTRD no Epithelial (MCF-7) 108185843
chr16 17461954 17462544 ZNF143 GTRD no Epithelial (MCF-7) 108185844
chr16 17461960 17462605 ZNF143 GTRD no Epithelial (MCF-7) 108185845
chr16 17461968 17462228 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108185846
chr16 17461972 17462867 ZNF274 GTRD no Blood (GM12878) 108185847
chr16 17461972 17462867 ZNF274 GTRD no Blood (GM12878) 108185848
chr16 17461982 17462783 ZNF143 GTRD no Epithelial (MCF-7) 108185849
chr16 17461987 17462002 ZIC3 JASPAR yes 9802019
chr16 17461987 17462002 ZIC4 JASPAR yes 9802020
chr16 17461987 17462002 ZIC3 JASPAR yes 49350111
chr16 17461987 17462002 ZIC4 JASPAR yes 49350112
chr16 17461988 17462002 ZIC1 JASPAR yes 9802021
chr16 17461988 17462002 ZIC1 JASPAR yes 49350113
chr16 17461989 17462956 ZNF274 GTRD no Blood (GM12878) 108185850
chr16 17461989 17462956 ZNF274 GTRD no Blood (GM12878) 108185851
chr16 17461995 17462002 SP1 TRANSFAC yes 9802022
chr16 17461995 17462002 SP1 TRANSFAC yes 49350114
chr16 17461995 17462342 ZNF274 GTRD no Bone Marrow (K562) 108185852
chr16 17461997 17462002 SP1 TRANSFAC yes 9802023
chr16 17461997 17462002 SP1 TRANSFAC yes 49350115
chr16 17461998 17462008 NFATC3 JASPAR yes 9802024
chr16 17461998 17462008 NFATC3 JASPAR yes 49350116
chr16 17462000 17462006 ETS1 JASPAR yes 9802025
chr16 17462000 17462006 ETS1 JASPAR yes 49350117
Genes associated with rs546228049[chr16:17462001], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More