EnhancerDB
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  3. rs546348790[chr2:28867473]
Enhancers that have rs546348790[chr2:28867473]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546348790[chr2:28867473]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28867459 28867474 IRF9 JASPAR yes 72663295
chr2 28867472 28867481 SOX9 JASPAR yes 72663296
chr2 28867473 28867488 RFX5 JASPAR yes 72663297
Genes associated with rs546348790[chr2:28867473], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More