EnhancerDB
  1. Home
  2. SNP
  3. rs546374050[chr19:13949828]
Enhancers that have rs546374050[chr19:13949828]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546374050[chr19:13949828]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390133
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390134
chr19 13949228 13953924 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851739
chr19 13949267 13950520 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851741
chr19 13949337 13954090 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851742
chr19 13949410 13949966 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851744
chr19 13949593 13950169 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851747
chr19 13949616 13950092 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851748
chr19 13949644 13950054 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851749
chr19 13949651 13949895 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851750
chr19 13949654 13950034 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851751
chr19 13949654 13950054 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851752
chr19 13949711 13950207 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851753
chr19 13949726 13950302 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851754
chr19 13949730 13950134 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851755
chr19 13949761 13950237 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851756
chr19 13949770 13950300 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851757
chr19 13949774 13950154 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851758
chr19 13949782 13950302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851759
chr19 13949785 13950301 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851760
chr19 13949795 13950371 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851761
chr19 13949799 13950119 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851762
chr19 13949802 13950138 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851763
chr19 13949804 13950184 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851764
chr19 13949812 13950092 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851765
chr19 13949817 13950197 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851766
chr19 13949818 13950122 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851767
chr19 13949819 13950129 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21851768
chr19 13949821 13950189 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851769
chr19 13949824 13950208 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851770
chr19 13949825 13950072 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851771
chr19 13949828 13950188 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21851772
chr19 13949828 13950238 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851773
Genes associated with rs546374050[chr19:13949828], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More