EnhancerDB
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  3. rs546385714[chr12:116935254]
Enhancers that have rs546385714[chr12:116935254]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116926365 116948935 enh43835
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Stomach Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs546385714[chr12:116935254]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116934842 116935306 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21577114
chr12 116934950 116935472 ZNF274 GTRD no Bone Marrow (K562) 21577116
chr12 116935157 116935643 ZNF274 GTRD no Bone Marrow (K562) 21577117
chr12 116935249 116935259 ELK1 JASPAR yes 124002852
chr12 116935251 116935261 GABPA JASPAR yes 124002853
chr12 116935253 116935259 ETS1 JASPAR yes 124002854
chr12 116935253 116935259 SPI1 JASPAR yes 124002855
Genes associated with rs546385714[chr12:116935254], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More