EnhancerDB
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  3. rs546396915[chr17:2862596]
Enhancers that have rs546396915[chr17:2862596]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2849745 2866995 enh4215
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs546396915[chr17:2862596]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2862587 2862607 TP53 JASPAR yes 52789949
chr17 2862589 2862609 TP63 JASPAR yes 52789950
chr17 2862590 2862608 TP53 JASPAR yes 52789951
chr17 2862590 2862608 TP63 JASPAR yes 52789952
chr17 2862590 2862608 TP73 JASPAR yes 52789953
chr17 2862592 2862607 TP53 JASPAR yes 52789954
Genes associated with rs546396915[chr17:2862596], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More