EnhancerDB
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  3. rs546414772[chr1:224394083]
Enhancers that have rs546414772[chr1:224394083]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224381693 224395855 enh12716
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs546414772[chr1:224394083]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224391415 224394417 ZNF274 GTRD no Bone Marrow (K562) 21384208
chr1 224391415 224394417 ZNF274 GTRD no Bone Marrow (K562) 107873609
chr1 224392280 224394097 ZNF274 GTRD no Bone Marrow (K562) 21384215
chr1 224392280 224394097 ZNF274 GTRD no Bone Marrow (K562) 107873614
chr1 224392293 224394186 ZNF274 GTRD no Bone Marrow (K562) 21384217
chr1 224392293 224394186 ZNF274 GTRD no Bone Marrow (K562) 107873615
chr1 224394073 224394086 HSF2 JASPAR yes 35693872
chr1 224394079 224394083 YY1 TRANSFAC yes 35693873
Genes associated with rs546414772[chr1:224394083], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More