EnhancerDB
  1. Home
  2. SNP
  3. rs546426990[chr1:9827367]
Enhancers that have rs546426990[chr1:9827367]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9816649 9832635 enh52
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs546426990[chr1:9827367]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9827360 9827374 PLAG1 JASPAR yes 26675239
chr1 9827367 9827372 SP1 TRANSFAC yes 26675240
Genes associated with rs546426990[chr1:9827367], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More