EnhancerDB
  1. Home
  2. SNP
  3. rs546429433[chr18:56209510]
Enhancers that have rs546429433[chr18:56209510]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56204885 56211735 enh4869
Liver Astrocyte Blood (Karpas-422) Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs546429433[chr18:56209510]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56208849 56209675 IKZF1 UCSC Txn Factor no Conserved 108338430
chr18 56209085 56209675 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824214
chr18 56209085 56209675 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338462
chr18 56209160 56209520 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824216
chr18 56209160 56209520 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338464
chr18 56209187 56209597 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824217
chr18 56209187 56209597 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338465
chr18 56209266 56209530 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21824218
chr18 56209266 56209530 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338466
chr18 56209502 56209511 NKX2-8 JASPAR yes 110957085
chr18 56209502 56209512 NKX2-3 JASPAR yes 110957086
Genes associated with rs546429433[chr18:56209510], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More