EnhancerDB
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  3. rs546441489[chr3:129385643]
Enhancers that have rs546441489[chr3:129385643]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 129373485 129387175 enh7531
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs546441489[chr3:129385643]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 129385642 129385652 ID4 JASPAR yes 5676756
chr3 129385642 129385652 TCF3 JASPAR yes 5676757
chr3 129385642 129385652 TCF4 JASPAR yes 5676758
chr3 129385643 129385652 SNAI2 JASPAR yes 5676759
Genes associated with rs546441489[chr3:129385643], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More