EnhancerDB
  1. Home
  2. SNP
  3. rs546444617[chr17:40402015]
Enhancers that have rs546444617[chr17:40402015]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs546444617[chr17:40402015]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40402009 40402023 TCF7L2 JASPAR yes 54289447
chr17 40402009 40402024 LEF1 JASPAR yes 54289448
chr17 40402013 40402019 TCF4 TRANSFAC yes 54289449
Genes associated with rs546444617[chr17:40402015], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More