EnhancerDB
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  3. rs546455164[chr6:25008418]
Enhancers that have rs546455164[chr6:25008418]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 24994525 25030795 enh9006
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs546455164[chr6:25008418]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25008413 25008423 ALX3 JASPAR yes 100812786
chr6 25008413 25008423 MNX1 JASPAR yes 100812787
chr6 25008414 25008422 LMX1A JASPAR yes 100812788
chr6 25008414 25008422 LMX1B JASPAR yes 100812789
chr6 25008414 25008422 NKX6-1 JASPAR yes 100812790
chr6 25008414 25008422 NKX6-2 JASPAR yes 100812791
chr6 25008414 25008422 VAX1 JASPAR yes 100812792
chr6 25008414 25008422 VAX2 JASPAR yes 100812793
chr6 25008414 25008422 VSX1 JASPAR yes 100812794
chr6 25008414 25008422 VSX2 JASPAR yes 100812795
chr6 25008414 25008427 DUXA JASPAR yes 100812796
chr6 25008415 25008426 DUX4 JASPAR yes 100812797
chr6 25008415 25008426 PHOX2A JASPAR yes 100812798
chr6 25008415 25008426 PROP1 JASPAR yes 100812799
Genes associated with rs546455164[chr6:25008418], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More