EnhancerDB
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  3. rs546503841[chr1:205248356]
Enhancers that have rs546503841[chr1:205248356]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
Transcript factors that have rs546503841[chr1:205248356]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205246524 205250029 ZNF274 GTRD no Bone Marrow (K562) 21371215
chr1 205246593 205250269 ZNF274 GTRD no Cervix (HeLa-S3) 21371216
chr1 205247158 205248429 ZNF143 GTRD no Epithelial (MCF-7) 21371229
chr1 205247161 205248799 ZNF274 GTRD no Cervix (HeLa-S3) 21371231
chr1 205247337 205250086 ZNF143 GTRD no Epithelial (MCF-7) 21371235
chr1 205247390 205249048 ZNF274 GTRD no Cervix (HeLa-S3) 21371236
chr1 205247742 205250034 ZNF143 GTRD no Epithelial (MCF-7) 21371240
chr1 205247750 205248419 ZNF143 GTRD no Epithelial (MCF-7) 21371241
chr1 205248262 205248601 ZNF274 GTRD no Cervix (HeLa-S3) 21371242
chr1 205248350 205248358 MEIS2 JASPAR yes 34750529
chr1 205248351 205248358 MEIS1 JASPAR yes 34750531
chr1 205248354 205248369 FOXP1 JASPAR yes 34750532
chr1 205248354 205248375 IRF1 JASPAR yes 34750533
chr1 205248355 205248370 FOXP1 JASPAR yes 34750534
Genes associated with rs546503841[chr1:205248356], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More