EnhancerDB
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  3. rs546519276[chr16:68782742]
Enhancers that have rs546519276[chr16:68782742]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 68769718 68797188 enh16743
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs546519276[chr16:68782742]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 68782729 68782745 SOX8 JASPAR yes 11221722
chr16 68782731 68782752 IRF1 JASPAR yes 11221723
chr16 68782732 68782753 IRF1 JASPAR yes 11221724
chr16 68782736 68782750 IRF7 JASPAR yes 11221725
chr16 68782737 68782757 RREB1 JASPAR yes 11221726
chr16 68782737 68782758 IRF1 JASPAR yes 11221727
chr16 68782738 68782744 TCF4 TRANSFAC yes 11221728
chr16 68782738 68782753 FOXP1 JASPAR yes 11221729
chr16 68782738 68782759 IRF1 JASPAR yes 11221730
chr16 68782739 68782754 STAT2 JASPAR yes 11221731
chr16 68782742 68782754 IRF1 JASPAR yes 11221732
chr16 68782742 68782756 IRF7 JASPAR yes 11221733
Genes associated with rs546519276[chr16:68782742], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More