EnhancerDB
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  3. rs546525373[chr2:30645140]
Enhancers that have rs546525373[chr2:30645140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 30621325 30653955 enh33182
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Lung Muscle (A673) Heart
chr2 30644994 30645276 vista30919
VISTA
Transcript factors that have rs546525373[chr2:30645140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 30645002 30645318 EBF1 UCSC Txn Factor no Conserved 108431702
chr2 30645128 30645149 ZNF263 JASPAR yes 22028813
chr2 30645128 30645149 ZNF263 JASPAR yes 72768575
chr2 30645130 30645151 ZNF263 JASPAR yes 22028814
chr2 30645130 30645151 ZNF263 JASPAR yes 72768576
chr2 30645133 30645154 ZNF263 JASPAR yes 22028815
chr2 30645133 30645154 ZNF263 JASPAR yes 72768577
chr2 30645134 30645155 IRF1 JASPAR yes 22028816
chr2 30645134 30645155 IRF1 JASPAR yes 72768578
chr2 30645137 30645152 FOXP1 JASPAR yes 22028817
chr2 30645137 30645152 FOXP1 JASPAR yes 72768579
chr2 30645138 30645153 FOXP1 JASPAR yes 22028818
chr2 30645138 30645153 FOXP1 JASPAR yes 72768580
chr2 30645138 30645159 IRF1 JASPAR yes 22028819
chr2 30645138 30645159 IRF1 JASPAR yes 72768581
chr2 30645139 30645154 FOXP1 JASPAR yes 22028820
chr2 30645139 30645154 FOXP1 JASPAR yes 72768582
chr2 30645140 30645161 IRF1 JASPAR yes 22028821
chr2 30645140 30645161 IRF1 JASPAR yes 72768583
Genes associated with rs546525373[chr2:30645140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More