EnhancerDB
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  3. rs546533814[chr16:89412658]
Enhancers that have rs546533814[chr16:89412658]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546533814[chr16:89412658]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89412652 89412667 FOXP1 JASPAR yes 12334226
chr16 89412656 89412671 FOXP1 JASPAR yes 12334227
chr16 89412656 89412677 IRF1 JASPAR yes 12334228
chr16 89412657 89412672 FOXP1 JASPAR yes 12334229
chr16 89412657 89412678 IRF1 JASPAR yes 12334230
chr16 89412658 89412673 FOXP1 JASPAR yes 12334231
chr16 89412658 89412679 IRF1 JASPAR yes 12334232
Genes associated with rs546533814[chr16:89412658], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More