EnhancerDB
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  3. rs546574721[chr2:235357487]
Enhancers that have rs546574721[chr2:235357487]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235350952 235364170 enh19343
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs546574721[chr2:235357487]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235357470 235357491 IRF1 JASPAR yes 81879227
chr2 235357472 235357487 PRDM1 JASPAR yes 81879229
chr2 235357474 235357495 IRF1 JASPAR yes 81879230
chr2 235357476 235357491 PRDM1 JASPAR yes 81879231
chr2 235357476 235357491 STAT2 JASPAR yes 81879232
chr2 235357477 235357491 SPIC JASPAR yes 81879233
chr2 235357477 235357491 STAT1 JASPAR yes 81879234
chr2 235357478 235357499 IRF1 JASPAR yes 81879235
chr2 235357479 235357494 FOXP1 JASPAR yes 81879236
chr2 235357479 235357500 IRF1 JASPAR yes 81879237
chr2 235357481 235357496 FOXP1 JASPAR yes 81879238
chr2 235357483 235357498 FOXP1 JASPAR yes 81879239
chr2 235357483 235357504 IRF1 JASPAR yes 81879240
chr2 235357484 235357499 FOXP1 JASPAR yes 81879241
chr2 235357485 235357500 FOXP1 JASPAR yes 81879242
chr2 235357486 235357501 FOXP1 JASPAR yes 81879243
chr2 235357487 235357502 FOXP1 JASPAR yes 81879244
Genes associated with rs546574721[chr2:235357487], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More