EnhancerDB
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  3. rs546597257[chr6:33579899]
Enhancers that have rs546597257[chr6:33579899]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs546597257[chr6:33579899]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33579890 33579906 NFYA JASPAR yes 101161095
chr6 33579892 33579911 CTCF JASPAR yes 101161096
chr6 33579893 33579899 NFIC JASPAR yes 101161097
chr6 33579895 33579899 H1TF2 TRANSFAC yes 101161098
chr6 33579895 33579899 NFE TRANSFAC yes 101161099
chr6 33579895 33579899 SRF TRANSFAC yes 101161100
Genes associated with rs546597257[chr6:33579899], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More