EnhancerDB
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  3. rs546641653[chr12:52672586]
Enhancers that have rs546641653[chr12:52672586]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52669305 52679150 enh14728
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs546641653[chr12:52672586]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52672579 52672600 IRF1 JASPAR yes 120934092
chr12 52672581 52672596 STAT2 JASPAR yes 120934093
chr12 52672582 52672596 STAT1 JASPAR yes 120934094
chr12 52672583 52672598 IRF9 JASPAR yes 120934095
Genes associated with rs546641653[chr12:52672586], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More