EnhancerDB
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  3. rs546658206[chr17:78773454]
Enhancers that have rs546658206[chr17:78773454]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs546658206[chr17:78773454]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78773436 78773457 IRF1 JASPAR yes 56281405
chr17 78773440 78773455 IRF9 JASPAR yes 56281407
chr17 78773448 78773454 ETS1 JASPAR yes 56281409
Genes associated with rs546658206[chr17:78773454], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More