EnhancerDB
  1. Home
  2. SNP
  3. rs546666213[chr6:35341438]
Enhancers that have rs546666213[chr6:35341438]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35320605 35341715 enh9075
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546666213[chr6:35341438]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35341420 35341441 IRF1 JASPAR yes 101277828
chr6 35341424 35341445 IRF1 JASPAR yes 101277829
chr6 35341432 35341453 IRF1 JASPAR yes 101277830
chr6 35341433 35341439 LEF1 TRANSFAC yes 101277831
chr6 35341433 35341439 SOX10 JASPAR yes 101277832
chr6 35341436 35341457 IRF1 JASPAR yes 101277833
Genes associated with rs546666213[chr6:35341438], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More