EnhancerDB
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  3. rs546703176[chr1:19254371]
Enhancers that have rs546703176[chr1:19254371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546703176[chr1:19254371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19254356 19254371 IRF9 JASPAR yes 27162029
chr1 19254366 19254381 RUNX2 JASPAR yes 27162030
chr1 19254367 19254376 RUNX2 JASPAR yes 27162031
chr1 19254367 19254377 RUNX3 JASPAR yes 27162032
Genes associated with rs546703176[chr1:19254371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More