EnhancerDB
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  3. rs546717890[chr12:53755703]
Enhancers that have rs546717890[chr12:53755703]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53754815 53768707 enh2366
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs546717890[chr12:53755703]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53752996 53756400 STAT3 GTRD no Blood (OCI-LY7) 21549172
chr12 53753528 53758059 ZNF274 GTRD no Cervix (HeLa-S3) 21549173
chr12 53754836 53756311 ZNF274 GTRD no Cervix (HeLa-S3) 21549179
chr12 53755300 53756185 ZNF274 GTRD no Bone Marrow (K562) 21549180
chr12 53755337 53756254 ZNF274 GTRD no Bone Marrow (K562) 21549181
chr12 53755343 53756289 ZNF143 GTRD no Epithelial (MCF-7) 21549182
chr12 53755448 53756119 ZNF274 GTRD no Bone Marrow (K562) 21549183
chr12 53755453 53756125 ZNF143 GTRD no Epithelial (MCF-7) 21549184
chr12 53755488 53756045 ZNF274 GTRD no Bone Marrow (K562) 21549185
chr12 53755515 53756047 ZNF143 GTRD no Epithelial (MCF-7) 21549186
chr12 53755519 53756011 ZNF274 GTRD no Bone Marrow (K562) 21549187
chr12 53755545 53755905 ZNF274 GTRD no Cervix (HeLa-S3) 21549188
chr12 53755552 53756112 ZNF274 GTRD no Bone Marrow (K562) 21549189
chr12 53755553 53755921 ZNF143 GTRD no Epithelial (MCF-7) 21549190
chr12 53755553 53756088 ZNF143 GTRD no Epithelial (MCF-7) 21549191
chr12 53755575 53756025 ZNF274 GTRD no Cervix (HeLa-S3) 21549192
chr12 53755590 53756273 ZNF143 GTRD no Epithelial (MCF-7) 21549193
chr12 53755643 53755955 ZNF274 GTRD no Bone Marrow (K562) 21549194
chr12 53755644 53755945 ZNF274 GTRD no Bone Marrow (K562) 21549195
chr12 53755666 53756075 ZNF274 GTRD no Bone Marrow (K562) 21549196
chr12 53755691 53755706 FOXP1 JASPAR yes 120982063
chr12 53755692 53755713 IRF1 JASPAR yes 120982064
chr12 53755694 53755709 FOXP1 JASPAR yes 120982065
chr12 53755698 53755713 FOXP1 JASPAR yes 120982066
chr12 53755699 53755711 FOXC2 JASPAR yes 120982067
chr12 53755700 53755711 FOXC1 JASPAR yes 120982068
chr12 53755701 53755705 YY1 TRANSFAC yes 120982069
chr12 53755702 53755717 FOXP1 JASPAR yes 120982070
Genes associated with rs546717890[chr12:53755703], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More