EnhancerDB
  1. Home
  2. SNP
  3. rs546720057[chr1:203496973]
Enhancers that have rs546720057[chr1:203496973]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546720057[chr1:203496973]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203496443 203497281 ZNF143 GTRD no Epithelial (MCF-7) 21369231
chr1 203496530 203497315 ZNF143 GTRD no Epithelial (MCF-7) 21369232
chr1 203496962 203496976 PLAG1 JASPAR yes 34635858
chr1 203496969 203496974 SP1 TRANSFAC yes 34635859
chr1 203496970 203496975 SP1 TRANSFAC yes 34635860
chr1 203496973 203496978 SP1 TRANSFAC yes 34635861
Genes associated with rs546720057[chr1:203496973], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More