EnhancerDB
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  3. rs546725309[chr1:232762797]
Enhancers that have rs546725309[chr1:232762797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs546725309[chr1:232762797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232762781 232762802 IRF1 JASPAR yes 36179204
chr1 232762783 232762798 IRF9 JASPAR yes 36179205
chr1 232762784 232762798 IRF8 JASPAR yes 36179206
chr1 232762785 232762799 SPIC JASPAR yes 36179207
chr1 232762785 232762799 STAT1 JASPAR yes 36179208
chr1 232762785 232762800 STAT2 JASPAR yes 36179209
chr1 232762787 232762808 IRF1 JASPAR yes 36179210
chr1 232762791 232762806 FOXP1 JASPAR yes 36179211
chr1 232762792 232762807 FOXP1 JASPAR yes 36179212
chr1 232762792 232762813 IRF1 JASPAR yes 36179213
chr1 232762793 232762808 FOXP1 JASPAR yes 36179214
chr1 232762796 232762811 STAT2 JASPAR yes 36179215
Genes associated with rs546725309[chr1:232762797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More