EnhancerDB
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  3. rs546730128[chr17:62700314]
Enhancers that have rs546730128[chr17:62700314]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62688405 62713087 enh17300
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546730128[chr17:62700314]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 21779174
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 108282599
chr17 62699237 62712934 ZNF143 GTRD no Epithelial (MCF-7) 108282600
chr17 62700210 62700948 ZNF143 GTRD no Epithelial (MCF-7) 21779179
chr17 62700302 62707777 ZNF143 GTRD no Epithelial (MCF-7) 21779181
chr17 62700302 62707777 ZNF143 GTRD no Epithelial (MCF-7) 108282601
chr17 62700302 62707777 ZNF143 GTRD no Epithelial (MCF-7) 108282602
chr17 62700307 62700316 HIC2 JASPAR yes 55314076
chr17 62700309 62700319 SP1 JASPAR yes 55314077
chr17 62700310 62700314 LFA1 TRANSFAC yes 55314078
Genes associated with rs546730128[chr17:62700314], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More