EnhancerDB
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  3. rs546766608[chr1:19257248]
Enhancers that have rs546766608[chr1:19257248]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546766608[chr1:19257248]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19257235 19257252 RARA JASPAR yes 27162396
chr1 19257247 19257251 ESR1 TRANSFAC yes 27162399
chr1 19257247 19257258 USF1 JASPAR yes 27162400
chr1 19257247 19257258 USF2 JASPAR yes 27162401
chr1 19257248 19257255 USF2 TRANSFAC yes 27162402
Genes associated with rs546766608[chr1:19257248], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More