EnhancerDB
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  3. rs546792599[chr2:69441128]
Enhancers that have rs546792599[chr2:69441128]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 69420509 69454195 enh18636
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Astrocyte Stomach Muscle (A673) Placenta Thyroid Uterus Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs546792599[chr2:69441128]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 69441118 69441133 TFAP2A JASPAR yes 74830240
chr2 69441118 69441133 TFAP2C JASPAR yes 74830241
chr2 69441120 69441133 TFAP2A JASPAR yes 74830242
chr2 69441120 69441133 TFAP2B JASPAR yes 74830243
chr2 69441120 69441133 TFAP2C JASPAR yes 74830244
chr2 69441120 69441134 EBF1 JASPAR yes 74830245
chr2 69441120 69441135 TFAP2A JASPAR yes 74830246
chr2 69441121 69441132 EBF1 JASPAR yes 74830247
chr2 69441121 69441133 TFAP2A JASPAR yes 74830248
chr2 69441121 69441133 TFAP2B JASPAR yes 74830249
chr2 69441121 69441133 TFAP2C JASPAR yes 74830250
chr2 69441121 69441140 RFX2 JASPAR yes 74830251
chr2 69441123 69441132 TFAP2A JASPAR yes 74830252
chr2 69441128 69441132 LFA1 TRANSFAC yes 74830253
Genes associated with rs546792599[chr2:69441128], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More