EnhancerDB
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  3. rs546797754[chr5:90599488]
Enhancers that have rs546797754[chr5:90599488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546797754[chr5:90599488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90599486 90599499 ZBTB18 JASPAR yes 64190263
chr5 90599487 90599499 PKNOX1 JASPAR yes 64190264
chr5 90599487 90599499 TGIF1 JASPAR yes 64190265
chr5 90599488 90599497 SNAI2 JASPAR yes 64190266
chr5 90599488 90599498 FIGLA JASPAR yes 64190267
chr5 90599488 90599498 ID4 JASPAR yes 64190268
chr5 90599488 90599498 TCF3 JASPAR yes 64190269
chr5 90599488 90599498 TCF4 JASPAR yes 64190270
Genes associated with rs546797754[chr5:90599488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More