EnhancerDB
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  3. rs546825327[chr6:25174742]
Enhancers that have rs546825327[chr6:25174742]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546825327[chr6:25174742]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25174732 25174752 RREB1 JASPAR yes 100831517
chr6 25174736 25174745 SNAI2 JASPAR yes 100831518
chr6 25174736 25174746 ID4 JASPAR yes 100831519
chr6 25174736 25174746 NHLH1 JASPAR yes 100831520
chr6 25174736 25174746 TCF3 JASPAR yes 100831521
chr6 25174736 25174746 TCF4 JASPAR yes 100831522
chr6 25174738 25174747 ZEB1 JASPAR yes 100831523
chr6 25174739 25174747 TBX5 JASPAR yes 100831524
Genes associated with rs546825327[chr6:25174742], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More