EnhancerDB
  1. Home
  2. SNP
  3. rs546856610[chr1:8508899]
Enhancers that have rs546856610[chr1:8508899]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546856610[chr1:8508899]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8508887 8508899 PBX1 JASPAR yes 26555738
chr1 8508888 8508902 ONECUT1 JASPAR yes 26555739
chr1 8508888 8508902 ONECUT2 JASPAR yes 26555740
chr1 8508888 8508902 ONECUT3 JASPAR yes 26555741
chr1 8508891 8508903 PBX1 JASPAR yes 26555742
chr1 8508891 8508911 RREB1 JASPAR yes 26555743
chr1 8508895 8508915 RREB1 JASPAR yes 26555744
chr1 8508899 8508919 RREB1 JASPAR yes 26555745
Genes associated with rs546856610[chr1:8508899], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More